- Training4lifescience - lists.nfdi.de

Online Training Event: "From Field Data to FAIR Data: how to manage your agrosystem research data"

by Sophie Bosse

English version below ******************************************************************************************************* Liebe Kolleginnen und Kollegen, wir möchten euch gerne auf unser Online-Training "From Field Data to FAIR Data: how to manage your agrosystem research data" aufmerksam machen. Der Workshop richtet sich insbesondere an Nachwuchswissenschaftler*innen aus allen Bereichen der Agrosystemforschung und vermittelt praxisnahe Ansätze für den Umgang mit Forschungsdaten entlang des gesamten Datenlebenszyklus - von der Erhebung im Feld und Labor bis zur FAIRen Publikation und Nachnutzung. Im interaktiven Format werden typische Herausforderungen aus dem Forschungsalltag aufgegriffen und Best Practices aufgezeigt. Ziel ist es, Forschende dabei zu unterstützen, ihre Daten strukturiert, nachhaltig und im Einklang mit aktuellen Standards zu managen. Wir würden uns sehr freuen, wenn Sie: * selbst teilnehmen * den Workshop an interessierte Kolleg*innen weiterleiten 21.04.2026 10:00-14:30 (Englisch) Registrierung: https://fairagro.net/event/training-from-field-data-to-fair-data-how-to-man… Bei Fragen wendet euch gerne an training(a)fairagro.net<mailto:training@fairagro.net> Liebe Grüße, Sophie, Lucia, Lea ******************************************************************************************************* Dear colleagues, We would like to draw your attention to our online training session "From Field Data to FAIR Data: how to manage your agrosystem research data". The workshop is aimed in particular at early-career researchers from all areas of agrosystem research and provides practical approaches to managing research data throughout the entire data lifecycle - from collection in the field and laboratory to FAIR publication and reuse. In an interactive format, typical challenges from everyday research are addressed and best practices are highlighted. The aim is to support researchers in managing their data in a structured, sustainable manner and in accordance with current standards. We would be delighted if you could: * take part yourself * forward the workshop details to interested colleagues 21 April 2026, 10:00-14:30 Registration: https://fairagro.net/en/event/training-from-field-data-to-fair-data-how-to-… If you have any questions, please contact training(a)fairagro.net<mailto:training@fairagro.net> Kind regards, Sophie, Lucia, Lea --------------------------------------------------------------------- Sophie Boße Trainingskoordinatorin FAIRagro ZB MED Infromationszentrum Lebenswissenschaften Gleuelerstr. 60 50931 Köln www.zbmed.de<http://www.zbmed.de/> INFORMATION. KNOWLEDGE. LIFE.

7 months, 1 week

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Invitation to de.NBI & ELIXIR Germany and GHGA webinar "Cloud-based bioimage analysis at EMBL", online 22.04.26 at 13:00 CEST

by González Ribao, Vanessa

*** Bitte beachten Sie, dass diese Veranstaltung ausschließlich in englischer Sprache stattfindet *** Dear NFDI Training Community, de.NBI & ELIXIR Germany<https://www.denbi.de/> and GHGA<http://www.ghga.de/> (The German Human Genome Phenome Archive) are inviting you to the next episode of our joint Webinar Series: Cloud-based bioimage analysis at EMBL. This webinar explores the integration of cloud infrastructure into biological image data analysis. The session provides a comprehensive overview of modern bioimage analysis workflows, spanning from interactive, exploratory analysis to automated, large-scale batch processing pipelines. Participants will gain insights into specific cloud-based tools and technologies designed to handle complex imaging data, along with a discussion on the practical advantages and implementation strategies for each approach. This webinar is aimed at students, early career researchers, clinicians, bioinformaticians and everyone interested in modernizing their image data workflows to improve reproducibility and computational efficiency. The webinar will be held by Yi Sun from EMBL Heidelberg (NFDI4BIOIMAGE). The event is in English, it takes approx. 60 minutes and will be held on the 22nd April 2026 at 13:00 CEST (available afterwards on demand). Attendance is free, but we ask for registration<https://dkfz-de.zoom-x.de/meeting/register/QHqeTwpNRfi_a-nsHUnXaw>. [cid:image001.png@01DCC026.AB55CF10] For more information or registration, visit our event website<https://www.ghga.de/events/detail/the-denbi-elixir-de-and-ghga-knowledge-se…>. The Organisation Team of the de.NBI & ELIXIR-DE and GHGA Knowledge Series GHGA - German Human Genome-Phenome Archive - www.ghga.de<http://www.ghga.de> de.NBI & ELIXIR Germany - www.denbi.de

7 months, 1 week

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WiNoDa Webinar "From Whiskers to Datasets: How We Study Small Mammals" - April 7th, 2026

by Bellini, Ginevra

Dear colleagues, [cid:14a0ee78-4578-403a-b92f-54cc2800140a] Are you curious about what tiny mammals can reveal about the state of our ecosystems? In the upcoming webinar from the WiNoDa Knowledge Lab<https://winoda.de/en/english/>, Dr. Anke Hoffmann<https://www.museumfuernaturkunde.berlin/en/museum/today/team/anke.hoffmann> will take you straight into the heart of small-mammal field research – where rodents and shrews become key indicators of biodiversity, habitat health, and environmental change. Dr. Hoffmann will present the research carried out by a German-Polish research team in the Lower Oder Valley National Park. You’ll learn how researchers capture and study these elusive, mostly nocturnal animals and discover the surprising variety of data they provide – from species identity and population trends to ecological relationships and habitat preferences. We’ll explore which data can be collected in the field, how they are analysed, and what they can tell us about broader ecological patterns. Whether you’re interested in species monitoring, conservation biology, data collection methods, or simply want a behind-the-scenes look at hands-on wildlife science, this session offers a clear and engaging introduction. The webinar will take place on April 7th at 11am CET. It is free but registration is required. For more information and registration, visit our website<https://winoda.de/en/event/webinar-small-mammal-field-research/>! On the YouTube channel of the Museum für Naturkunde Berlin you can find a short video introduction to the project<https://www.youtube.com/watch?v=-6YuGB3X3c4&t=9s>, with English subtitles available. This session is a great introduction also for our upcoming Summer School "Ecology Field Training: Data Collection and Analysis at Lower Oder Valley"<https://winoda.de/en/event/ecology-field-training/> taking place from July 21st to July 25th, in presence at the Lower Oder Valley National Park. Registration will open soon — save the date! We hope to see you there! Kind regards, Ginevra Bellini ~~~ Dr. Ginevra Bellini (she/her_sie/ihr) Community Manager WiNoDa Knowledge Lab Email: ginevra.bellini(a)mfn.berlin<mailto:ginevra.bellini@mfn.berlin> WiNoDa Knowledge Lab web page<https://winoda.de/en/english/> | WiNoDa LinkedIn<https://www.linkedin.com/company/winoda> Museum für Naturkunde Berlin Leibniz-Institut für Evolutions- und Biodiversitätsforschung Invalidenstraße 43 10115 Berlin | Germany [cid:b48d2182-cfb1-4a1e-9de1-32450212f6d1]

7 months, 4 weeks

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Invitation to de.NBI & ELIXIR Germany and GHGA webinar "Variant Effect Prediction with Deep Mutational Scanning Data" , online 03.03.26 at 13:00 CET

by González Ribao, Vanessa

*** Bitte beachten Sie, dass diese Veranstaltung ausschließlich in englischer Sprache stattfindet *** Dear NFDI Training Community, de.NBI & ELIXIR Germany<https://www.denbi.de/> and GHGA<http://www.ghga.de/> (The German Human Genome Phenome Archive) are inviting you to the next episode of our joint Webinar Series: Practical Variant Effect Prediction with Deep Mutational Scanning Data. This webinar provides a practical, end-to-end walkthrough of accessing, interpreting, and extending DMS data using open community resources and machine learning models. Guidance is provided on how these approaches can be applied responsibly in both research and translational contexts. The webinar will be held by Polina Polunina from the University of Freiburg. The event is in English, it takes approx. 60 minutes and will be held on the 3rd March 2026 at 13:00 CET (available afterwards on demand<https://www.youtube.com/playlist?list=PLXMwmQxyLByXU38-1aG7m-b1A6UADZcxw>). Attendance is free, but we ask for registration<https://dkfz-de.zoom.us/meeting/register/I2mI2NBfQEywYcTUewN1mg#/registrati…>. [cid:image001.png@01DCA0D1.14A244A0] For more information or registration, visit our event website<https://www.ghga.de/events/detail/the-denbi-elixir-de-and-ghga-knowledge-se…>. The Organisation Team of the de.NBI & ELIXIR-DE and GHGA Knowledge Series GHGA - German Human Genome-Phenome Archive - www.ghga.de<http://www.ghga.de> de.NBI & ELIXIR Germany - www.denbi.de Dr. Vanessa González Ribao German Human Genome-Phenome Archive Training Coordinator for Data Protection www.ghga.de German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 280 69120 Heidelberg Germany vanessa.gonzalezribao(a)dkfz-heidelberg.de<mailto:vanessa.gonzalezribao@dkfz-heidelberg.de> www.dkfz.de<http://www.dkfz.de/> [cid:image002.png@01DCA0D1.14A244A0] Management Board: Prof. Dr. med. Dr. h. c. Michael Baumann, Ursula Weyrich VAT-ID No.: DE143293537

8 months, 2 weeks

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"Biodiversity Bioinformatics Summer School", 21-26 June 2026, Siegen (Germany)

by Helena Schnitzer

Dear colleagues, de.NBI & ELIXIR-DE<https://www.denbi.de/> and SIB & ELIXIR-CH<https://www.sib.swiss/> are pleased to announce the Biodiversity Bioinformatics Summer School 2026<https://www.sib.swiss/training/course/20260621_SSBIB> This jointly organised event will take place from 21 to 26 June 2026 in Siegen, Germany. Biodiversity is fundamental to ecosystem functioning, yet it is facing unprecedented pressure. Advances in the generation, analysis and integration of omics data by bioinformatics tools are transforming our ability to study biodiversity across scales through comprehensive, high-throughput molecular profiling of organisms and ecosystems. This summer school aims to equip life scientists with extended knowledge and practical skills to address these challenges. It will follow a hackathon / mini-project format, with around 20 hours dedicated to hands-on training and collaborative problem-solving. Each participant will work within a single group throughout the week, fostering deep engagement, collaborative problem-solving, and the exchange of knowledge and expertise. Experienced trainers will guide four groups, focusing on the following topics: * Biodiversity across scales – from eDNA to ecosystems * Pangenomes: Capturing genetic diversity beyond a single reference * Computing Genomic Essential Biodiversity Variables * Evolutionary and functional insights from large-scale comparative genomics To complement the project work, the programme will include lectures and a social activity. Participants will stay together in a comfortable hotel, creating an environment that encourages informal exchanges and networking beyond the formal sessions. Accommodation and meals are included in the registration fee, allowing participants to focus entirely on training, collaboration, and community building. More information and application: https://www.sib.swiss/training/course/20260621_SSBIB The deadline for application is 16 March. After submitting your application, you will receive an email from the organisers with instructions to complete a short survey and submit a motivation letter. You will be then notified of your registration status as soon as possible. Don’t hesitate to contact us with any questions. Best regards, Helena Schnitzer (de.NBI & ELIXIR Germany), on behalf of the organisers. -- Training Platform Coordinator - ELIXIR-DE Institut für Bio- und Geowissenschaften Computergestützte Metagenomik (IBG-5) Forschungszentrum Jülich GmbH c/o Universität Bielefeld/TechFak Universitätsstraße 25 33615 Bielefeld E-Mail: h.schnitzer(a)fz-juelich.de<mailto:h.schnitzer@fz-juelich.de> www.denbi.de<http://www.denbi.de> www.elixir-europe.org<http://www.elixir-europe.org> --------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------- Forschungszentrum Jülich GmbH 52425 Jülich Sitz der Gesellschaft: Jülich Eingetragen im Handelsregister des Amtsgerichts Düren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Stefan Müller Geschäftsführung: Prof. Dr. Astrid Lambrecht (Vorsitzende), Dr. Stephanie Bauer (stellvertretende Vorsitzende), Prof. Dr. Ir. Pieter Jansens, Prof. Dr. Laurens Kuipers --------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Jülich GmbH 52425 Jülich Sitz der Gesellschaft: Jülich Eingetragen im Handelsregister des Amtsgerichts Düren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Stefan Müller Geschäftsführung: Prof. Dr. Astrid Lambrecht (Vorsitzende), Dr. Stephanie Bauer (stellv. Vorsitzende), Prof. Dr. Ir. Pieter Jansens, Prof. Dr. Laurens Kuipers ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

8 months, 3 weeks

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Invitation to de.NBI & ELIXIR Germany and GHGA webinar "How to start to make your custom AI agent" , online 23.02.26 at 13:00 CET

by González Ribao, Vanessa

*** Bitte beachten Sie, dass diese Veranstaltung ausschließlich in englischer Sprache stattfindet *** Dear Training Community, de.NBI & ELIXIR Germany<https://www.denbi.de/> and GHGA<http://www.ghga.de/> (The German Human Genome Phenome Archive) are inviting you to the next episode of our joint Webinar Series: How to start to make your custom AI agent, from commercial providers to academic providers or local installations for added security and privacy. In this practical webinar we will introduce some, not so well known, uses of large language models (LLMs) such as ChatGPT or DeepSeek, for example we will give it a "persona" so it provides more specialized answers and we will teach it to use custom terminology so the users can get non-answers. We will use an LLM provider that focuses on privacy and security and targets academic usage, so the customizations are not made public unless it is specifically requested. We will also show how to add relevant documents to the LLMs context, to enable it to generate better responses, and we will note risks and how to mitigate these risks, while we are using these tools. At the end we will point to additional resources for participants to continue to create custom LLMs. [cid:image005.png@01DC99A5.DBDA90A0] For more information or registration, visit our event website<https://www.ghga.de/events/detail/the-denbi-elixir-de-and-ghga-knowledge-se…>. The Organisation Team of the de.NBI & ELIXIR-DE and GHGA Knowledge Series GHGA - German Human Genome-Phenome Archive - www.ghga.de<http://www.ghga.de> de.NBI & ELIXIR Germany - www.denbi.de Dr. Vanessa González Ribao German Human Genome-Phenome Archive Training Coordinator for Data Protection www.ghga.de German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 280 69120 Heidelberg Germany vanessa.gonzalezribao(a)dkfz-heidelberg.de<mailto:vanessa.gonzalezribao@dkfz-heidelberg.de> www.dkfz.de<http://www.dkfz.de/> [cid:image006.png@01DC99A5.DBDA90A0] Management Board: Prof. Dr. med. Dr. h. c. Michael Baumann, Ursula Weyrich VAT-ID No.: DE143293537

8 months, 4 weeks

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Invitation to de.NBI & ELIXIR Germany and GHGA workshop on RDM for sensitive data, online on Jan 27-28, 2026

by González Ribao, Vanessa

*** Bitte beachten Sie, dass diese Veranstaltung ausschließlich in englischer Sprache stattfindet *** Dear NFDI4lifescience Community, de.NBI & ELIXIR Germany<https://www.denbi.de/> and GHGA<http://www.ghga.de/> (The German Human Genome Phenome Archive) are inviting you to the collaborative workshop "Mastering Research Data Management for Human Data: Safeguarding Sensitive Information and Elevating Data Security 2026" The workshop will take place virtually on the 27th and 28th 2026, from 10:00 to 13:00 CET. This course comprehensively explores RDM principles and practices, specifically tailored to human data. You will learn how to effectively manage, protect, and secure sensitive information while adhering to ethical standards and in compliance with the General Data Protection Regulation (GDPR). [cid:image001.jpg@01DC83CE.C3AB0920] For more information or registration, visit our event website<https://www.denbi.de/training-courses-2026/1989-mastering-research-data-man…>. The Organisation Teams of the de.NBI & ELIXIR-DE and GHGA GHGA - German Human Genome-Phenome Archive - www.ghga.de<http://www.ghga.de> de.NBI & ELIXIR Germany - www.denbi.de Kind regards, Dr. Vanessa González Ribao German Human Genome-Phenome Archive Training Coordinator for Data Protection www.ghga.de German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 280 69120 Heidelberg Germany vanessa.gonzalezribao(a)dkfz-heidelberg.de<mailto:vanessa.gonzalezribao@dkfz-heidelberg.de> www.dkfz.de<http://www.dkfz.de/> [cid:image002.png@01DC83CE.C3AB0920] Management Board: Prof. Dr. med. Dr. h. c. Michael Baumann, Ursula Weyrich VAT-ID No.: DE143293537

9 months, 3 weeks

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"Die Lizenz zum Forschen" neuer Termin für FARIRagro Workshop zum Recht an Forschungsdaten

by Sophie Bosse

Liebe Kolleginnen, liebe Kollegen, wem gehören eigentlich die Daten, die sie erhoben haben und mit denen sie täglich arbeiten? Wie können lizensierte oder nicht lizensierte Forschungsdaten nachgenutzt werden? Und was haben Urheberrecht und Gute Wissenschaftliche Praxis mit all dem zu tun? Diesen Fragen geht der dreiteilige Workshop "Die Lizenz zum Forschen" nach, der sich explizit an Forschende aus den Erdsystem-, Umwelt- und Agrarwissenschaften richtet. Nachdem der Ursprüngliche Termin aus gesundheitlichen Gründen leider abgesagt werden musste, ist die Anmeldung für die Workshopreihe vom 24.bis 26. März 2026 jeweils von 10-12 Uhr jetzt geöffnet. Der Workshop findet in deutscher Sprache statt. Wir freuen uns sehr über zahlreiche Anmeldungen<https://fairagro.net/event/legal-workshop-episode-iii-die-lizenz-zum-forsch…>! Leitet die Info gerne auch an andere interessierte weiter. Die genaue Agenda, sowie das Registrierungsformular sind hier<https://fairagro.net/event/legal-workshop-episode-iii-die-lizenz-zum-forsch…> zu finden. Lea Singson und Sophie Boße ---------------------------------------------------------- Sophie Boße Training coordinator FAIRagro ZB MED Information Centre for Life Sciences Gleuelerstr. 60 50931 Cologne www.zbmed.de<http://www.zbmed.de/> INFORMATION. KNOWLEDGE. LIFE.

9 months, 3 weeks

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Invitation to de.NBI & ELIXIR-DE and GHGA Webinar - Galaxy for analysis of human health data - online, 14.01.2026 13:00 CET

by González Ribao, Vanessa

*** Bitte beachten Sie, dass diese Veranstaltung ausschließlich in englischer Sprache stattfindet *** Dear NFDI4lifescience Community, de.NBI & ELIXIR Germany<https://www.denbi.de/> and GHGA<http://www.ghga.de/> (The German Human Genome Phenome Archive) are inviting you to the next episode of our joint Webinar Series: Galaxy for analysis of human health data. This webinar will highlight several new features and tools added to Galaxy over the last year that further increase the platform's usability, in particular for multi-omics human health data. Specific topics include, among a few others: * integration of Flexynesis for deep-learning-based exploration of multi-omics data, including cBioportal studies, as a tool in Galaxy * the new CELLxGENE integration into Galaxy * new data resources directly accessible from the Galaxy user interface, like Tabula Sapiens reference atlas data * enhancements around Galaxy's storage options that allow users to bring their own cloud storage and connect it to their Galaxy user account The webinar will be held by Wolfgang Maier from the University of Freiburg. The event is in English, it takes approx. 60 minutes and will be held on 14th January 2026 at 13:00 CET (available afterwards on demand<https://www.youtube.com/@ghga-thegermanhumangenome>). Attendance is free, but we ask for registration.<https://dkfz-de.zoom.us/meeting/register/9X8ohJdoSHeAZ8g8ivQlLQ#/registrati…> [cid:image001.png@01DC7FC7.46332A50] For more information or registration, visit our event website<https://www.ghga.de/events/detail/the-denbi-elixir-de-and-ghga-knowledge-se…>. The Organisation Team of the de.NBI & ELIXIR-DE and GHGA Knowledge Series GHGA - German Human Genome-Phenome Archive - www.ghga.de<http://www.ghga.de> de.NBI & ELIXIR Germany - www.denbi.de<http://www.denbi.de> Kind regards, Dr. Vanessa González Ribao German Human Genome-Phenome Archive Training Coordinator for Data Protection www.ghga.de German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 280 69120 Heidelberg Germany vanessa.gonzalezribao(a)dkfz-heidelberg.de<mailto:vanessa.gonzalezribao@dkfz-heidelberg.de> www.dkfz.de<http://www.dkfz.de/> [cid:image002.png@01DC7FC7.46332A50] Management Board: Prof. Dr. med. Dr. h. c. Michael Baumann, Ursula Weyrich VAT-ID No.: DE143293537

10 months

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Invitation to de.NBI & ELIXIR-DE and GHGA Webinar - Galaxy for analysis of human health data - online, 14.01.2026 13:00 CET

by González Ribao, Vanessa

*** Bitte beachten Sie, dass diese Veranstaltung ausschließlich in englischer Sprache stattfindet *** Dear NFDI4lifescience Community, de.NBI & ELIXIR Germany<https://www.denbi.de/> and GHGA<http://www.ghga.de/> (The German Human Genome Phenome Archive) are inviting you to the next episode of our joint Webinar Series: Galaxy for analysis of human health data. This webinar will highlight several new features and tools added to Galaxy over the last year that further increase the platform's usability, in particular for multi-omics human health data. Specific topics include, among a few others: * integration of Flexynesis for deep-learning-based exploration of multi-omics data, including cBioportal studies, as a tool in Galaxy * the new CELLxGENE integration into Galaxy * new data resources directly accessible from the Galaxy user interface, like Tabula Sapiens reference atlas data * enhancements around Galaxy's storage options that allow users to bring their own cloud storage and connect it to their Galaxy user account The webinar will be held by Wolfgang Maier from the University of Freiburg. The event is in English, it takes approx. 60 minutes and will be held on 14th January 2026 at 13:00 CET (available afterwards on demand<https://www.youtube.com/@ghga-thegermanhumangenome>). Attendance is free, but we ask for registration.<https://dkfz-de.zoom.us/meeting/register/9X8ohJdoSHeAZ8g8ivQlLQ#/registrati…> [cid:image001.png@01DC701E.B61B6250] For more information or registration, visit our event website<https://www.ghga.de/events/detail/the-denbi-elixir-de-and-ghga-knowledge-se…>. The Organisation Team of the de.NBI & ELIXIR-DE and GHGA Knowledge Series GHGA - German Human Genome-Phenome Archive - www.ghga.de<http://www.ghga.de> de.NBI & ELIXIR Germany - www.denbi.de Dr. Vanessa González Ribao German Human Genome-Phenome Archive Training Coordinator for Data Protection www.ghga.de German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 280 69120 Heidelberg Germany vanessa.gonzalezribao(a)dkfz-heidelberg.de<mailto:vanessa.gonzalezribao@dkfz-heidelberg.de> www.dkfz.de<http://www.dkfz.de/> [cid:image002.png@01DC701E.B61B6250] Management Board: Prof. Dr. med. Dr. h. c. Michael Baumann, Ursula Weyrich VAT-ID No.: DE143293537

10 months, 3 weeks

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2026

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