Dear experts and beginners in taxonomy and knowledge graphs,
we are really excited to see what the collaboration between two of our NFDI4Microbiota Use
Cases has brought to fruition.
Join us to enable microbial description at large scale!
During this hands-on workshop, our speakers will introduce the background of identifying,
culturing and describing novel information
of prokaryotic taxa, with a focus on making taxonomic descriptions accessible for further
large-scale downstream analysis.
This beginner-friendly workshop will guide you through the basic concepts of taxonomic
descriptions and transforming data for
knowledge graph applications. During the subsequent demonstration, you will be able to
apply the knowledge with some hands-on examples.
After this workshop, we will have learned and transformed the way we describe novel
microbial taxa.
Meeting details
Date
Monday, July 6th 2026
Time
14:00 - 16:00 CEST (Berlin time)
20:00 - 22:00 HKT (Hong Kong time)
08:00 - 10:00 EDT (New York time)
Location
online.
Please register to receive the
link.<https://events.hifis.net/event/4221/>
The tools used during the workshop
The tool providing our dataset:
https://protologger.bi.denbi.de<https://protologger.bi.denbi.de/>
The tool collecting our transformed bacterial information: WikiBase instance (link will be
shared during the workshop)
The speakers
1. Assist.-Prof. Dr. Thomas C.A. Hitch
The Chinese University of Hong Kong
Bioinformatician, Protologger developer, Taxonomist
2. Vanessa Scharf, M.Sc.
ZB MED Information Centre for Life Sciences, Cologne
Bioinformatician, Data Scientist, Knowledge Graph developer
3.
Prof. Dr. Thomas Clavel
University Hospital of RWTH Aachen
Microbiologist, Functional microbiome research
Warm regards,
Maja (Magel)
The NFDI4Microbiota Outreach Team
Carmen Paulmann, Lina Junctorius, Maja Magel
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