12:55 p.m.
Dear colleagues,
We warmly invite you to our next NFDI4Microbiota Coffee Talk with Ivan Belyaev from the
Friedrich Schiller University Jena, Germany
Topic: "BEXIS2 — a user-friendly Platform for Metadata Management"
BEXIS2 is a free and open-source community-driven web-based research data management
system . It facilitates the rich metadata annotation, data provenance preservation, and
semantic integration of different data types acquired in microbiological experiments or
collected in the natural environment. The simultaneous support of multiple schemas and the
data-agnostic architecture of the software alleviate the management of complex data,
including those acquired by correlative methods, like correlative light-electron
microscopy or spatial proteomics. The system modularity allows modification of its various
components, from database schemes to the user interface. The OpenAPI-compliant APIs of the
BEXIS2 simplify the development of new functions and integration with third-party software
(e.g. OMERO).
In the Cluster of Excellence ‘Balance of the Microverse’ , we are instantiating the BEXIS2
as a meta-data management platform that implements community-accepted minimal information
standards (e.g. REMBI, MIAPE, dMIQE2020, MARGARITAS) in conjunction with ontologies and
controlled vocabularies. For that, we are developing a new interface module for external
terminology services, such as TS4NFDI. In this contribution, we will provide technical
details on the BEXIS2 architecture, discuss recent advances, and demonstrate metadata
management workflow for NMR and light microscopy data.
📅 Monday, 30 June 2025 | 14:30–15:30 CEST
⏰ https://helmholtz-hzi-de.zoom-x.de/j/68764089023?pwd=cvlqk3FLgKyIyK3xkUy2...
We look forward to seeing you there!
Best regards,
The NFDI4Microbiota Outreach Team
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