Dear Colleagues,
Here is the summary of today's regular TA1/2 call. Thank you all for the great
discussions! Please take a moment to rate the quality of today's call: [Meeting
Quality
Feedback](https://ulrikstervbo.aidaform.com/meeting-quality-feedback).
Next call is Thursday Sep 4 at 11:00.
Action Items
- Everyone: Look at the [User Conference 2025 -
Base4NFDI](https://base4nfdi.de/news-events/events/user-conference-2025), and e-mail
Lina/Ulrik re topics of particular interest you want feedback on.
- Daniel and Vera: Researching Wagtail.
Call Summary
Ulrik informed there had been no progress on finalizing the WBS. Daniel commented on
better integration of legal considerations, and adding extra activities to the WBS Level 1
components was encouraged - especially activities that tie in other components.
At the end of the call Daniel mentioned [
Wagtail](https://wagtail.org/features/), a Django
based content management system. Daniel and Vera will see which parts may be directly
relevant to us. Christian Wünsch raised the need for involving all TAs to get a bigger
picture of the whole repository infrastructure. Tasks relevant for the establishment of
the repository should be distributed to the TAs with the skills and manpower. Ulrik
mentioned he is working on getting TA-leads to define this. Ulrik mentioned creating an
overview of more complete metadata model for CoRDI, which is accessible here:
https://miro.com/app/board/uXjVIDJmedI=/
The majority of the call was devoted focus group updates:
- Search Database: Focus on technical and legal aspects of the search index.
- Metadata Completeness and QA: researching existing scores, challenge in weighting
different properties.
- Web and command line client API: A draft for all endpoints has been created and those
relevant for MVP have been selected.
- GDPR & Data Privacy Compliance: Preparation of an internal seminar at the end of
September as well as legal framework and contract templates.
- Submission pipeline and Validation service: Focus on adding FastAPI to the existing
validation service.
We agreed on the following feedback deadlines:
- Update in 2 weeks (Sep 4)
- Search database (Vera)
- Submission pipeline and Validation service (Vera)
- Update in 4 weeks (Sep 18)
- Front-end (Lina)
- Web and command line client API (Ulrik)
- Metadata schema/Study ?
- Metadata schema/Subject ?
- Metadata schema/Sample ?
- GDPR & Data Privacy Compliance (Conny)
- Model Lifecycle Management (Ulrik)
- Update in 6 weeks (Oct 2)
- Metadata schema/AIRR-seq (Ulrik)
- Data from NFDI4Immuno are made available (Conny)
- What is needed from other focus groups to enable completion of this component
- Analysis pipeline integration (Ulrik)
Backlog Items
Next realistic update deadline from:
- Metadata completeness and QA (Ferrara)
- DCAT-AP/HealthDCAT-AP (Böhm)
Best,
Ulrik
----
Dr. rer. nat. Ulrik Stervbo
Center for Translational Medicine, Immunology, and Transplantation
Marien Hospital Herne - Universitätsklinikum der Ruhr-Universität Bochum
Hölkeskampring 40
44623 Herne
Germany
Immundiagnostik
Marien Hospital Herne - Universitätsklinikum der Ruhr-Universität Bochum
Düngelstr 33
44623 Herne
Germany
Tel: +49 234 509 590 54
www.marienhospital-herne.de/TranslationaleMedizin<http://www.marienhos...
www.babel-lab.de<http://www.babel-lab.de/>
_______________________________________________________________
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Medizinische Reha für psychische Gesundheit, St. Elisabeth Stift Herne,
Senioreneinrichtungen Widumer Höfe,
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Lukas Hospiz Herne, St. Elisabeth Hospiz Witten, Bildungszentrum Ruhr, Bildungswerk,
Campus der St. Elisabeth Gruppe, Kinder in der St. Elisabeth Gruppe
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Geschäftsführung: Dr. Sabine Edlinger, Simone Lauer
Registergericht:
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St.-Nr.: 325/5894/2251
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