Dear Colleagues,
Here is the summary of today’s regular TA1/2 call. Thank you all for the great interactions!
- We started with a brief welcome and a spillover discussion from the Model Development Group on Ontology validation.
- Ulrik provided a summary of the search functionality visions.
Open Loops for SP25 Deadline
- We discussed the open loops for the SP25 deadline, which is set for *June 30*. Here are the key points:
- Group 1:
- We realized that 'Disease' is missing in the model. Unclear is why.
- Ulrik and Daniel will determine the current status and ideas.
- Update model as needed.
- Deadline: June 13
- Group 2:
- Elements of simple controlled vocabularies were discussed, including biological sex, data access level, subject type, study type, species, and time units.
- Complex ontologies such as Human comorbidities, Ancestry, and Tissue are excluded for SP25 but need validation.
- Simple controlled vocabularies needs to be defined and included in the templates for SP25
- Deadline: June 18
- Group 1:
- Heike and Conny fill data using the templates with defined simple controlled vocabularies
- Deadline: June 23
- Group 3: Final Model and Template
- Need a list of selected terms for each controlled vocabulary and a template filled with real data.
- Create a final validation pipeline
- Deadline: June 30
Action Items
Ulrik/Daniel: Check if the disease is in the model and determine the current status and ideas.
Backlog Items
- Improving Intra-Group Communication
- Ulrik briefly mentioned initiating a thinking process to improve intra-group communication.
- Organizational chart and WP25 Timeline
- Ferrara will present work on the organizational chart and WP25 Timeline at the next call
Please keep all deadlines in mind that we can deliver a prototype by the end of the month. If you have any questions or need further clarification on any of the action items, feel free to reach out.
Best,
Ulrik
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Dr. rer. nat.
Ulrik Stervbo
Center for Translational Medicine, Immunology, and Transplantation
Marien Hospital Herne – Universitätsklinikum der Ruhr-Universität Bochum
Hölkeskampring 40
44623 Herne
Germany
Immundiagnostik
Marien Hospital Herne – Universitätsklinikum der Ruhr-Universität Bochum
Düngelstr 33
44623 Herne
Germany
Tel: +49
234 509 590 54
www.marienhospital-herne.de/TranslationaleMedizin
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Campus der St. Elisabeth Gruppe, Kinder in der St. Elisabeth Gruppe
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St.-Nr.: 325/5894/2251
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