March 2025 - NFDI4Immuno - TA1 & TA2

INFO: Friendly reminder about tomorrow's TA1/TA2 call

by Stervbo,Ulrik

to: TA1/2 NFDI4Immuno (nfdi4immuno-ta1-2(a)lists.nfdi.de) Dear TA1/2 Members, This is a friendly reminder about our joint TA1/TA2 call scheduled for tomorrow from 11:00 - 12:00 (11:58). You can join the call using the following link: https://conf.dfn.de/webapp/#/?conference=979176819. The PIN is 7570 (host pin: 7579). At the end of last week's call, the question of efficacy was raised, so we will use the call to discuss this topic. We will start by briefly reiterating the concrete moving parts needed for the June prototype, followed by a discussion of how we may best organize ourselves. To streamline the first part of the discussion, please identify and define the necessary moving parts in advance. You can find the call minutes on the NFDI4Immuno NextCloud under Task Area 1 > Call minutes (https://nextcloud.nfdi4immuno.de/f/1608). The agenda for tomorrow's call is stored at the same location. Updates/FYIs/Reminders: - Please use the TA1+2 mailing list for communications - the old TA1 does not let emails through and there is no notification If you're unable to attend, please let me know. Regular joint TA1/TA2 calls are every Thursday 11:00 - 12:00. Best, Ulrik ---- Dr. rer. nat. Ulrik Stervbo Center for Translational Medicine, Immunology, and Transplantation Marien Hospital Herne - Universitätsklinikum der Ruhr-Universität Bochum Hölkeskampring 40 44623 Herne Germany Immundiagnostik Marien Hospital Herne - Universitätsklinikum der Ruhr-Universität Bochum Düngelstr 33 44623 Herne Germany Tel: +49 234 509 590 54 www.marienhospital-herne.de/TranslationaleMedizin<http://www.marienhospital-herne.de/TranslationaleMedizin> www.babel-lab.de<http://www.babel-lab.de/> _______________________________________________________________ Mitten in der St. Elisabeth Gruppe: St. Anna Hospital Herne, Marien Hospital Herne - Universitätsklinikum der Ruhr-Universität Bochum, Marien Hospital Witten, Rheumazentrum Ruhrgebiet, St. Marien Hospital Eickel, Medizinische Reha für psychische Gesundheit, St. Elisabeth Stift Herne, Senioreneinrichtungen Widumer Höfe, Gästehaus St. Elisabeth, Ambulante Pflege, MVZ Ärzte - Herne | Wanne | Witten, Lukas Hospiz Herne, St. Elisabeth Hospiz Witten, Bildungszentrum Ruhr, Bildungswerk, Campus der St. Elisabeth Gruppe, Kinder in der St. Elisabeth Gruppe _______________________________________________________________ Aufsichtsratsvorsitzender: Dr. Hans Willmes Geschäftsführung: Dr. Sabine Edlinger, Simone Lauer Registergericht: HRB 9735 Amtsgericht Bochum St.-Nr.: 325/5894/2251 _______________________________________________________________ Wir bitten wegen der aktuellen Virenangriffe um folgende Beachtung: Das Sicherheitskonzept der St. Elisabeth Gruppe erlaubt momentan keine Zustellung von .doc (x) und .xls(x) Dateien! Schicken Sie Dokumente nur in Form von .pdf Dateien oder nehmen Sie Kontakt auf, um andere Übertragungsmöglichkeiten abzusprechen.

1 year, 1 month

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Uploaded PID List to Nextcloud

by Sebastian Ferrara

Dear colleagues, I have uploaded the document: 2025-03-07_List_of_PIDs to the folder 1_Data model development. Best, Sebastian Ferrara

1 year, 1 month

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DEADLINE APPROACHES: BioMed Metadata Interoperability Meeting March

by Böhm, Sebastian

Dear all, in preparation for the next meeting (19th of March), please send me the name of the person who will briefly present your consortias metadata, and highlights the MEM (Minimal essential Metadata) from their project. Please send them to me before the meeting (latest 16th of March), so that I can create a consortia overspanning sheet with the MEM. Regarding the in-person meeting, it seems that the indicated week is not very suitable as the easter holidays are in that week in some federal states of Germany. We will discuss any other suitable spot in the next meeting. Have a great start into the week everyone. Best wishes, Sebastian Dr. Sebastian Böhm Institut für Immunologie ___________________________________________ Friedrich-Loeffler-Institut Bundesforschungsinstitut für Tiergesundheit Federal Research Institute for Animal Health Südufer 10 | 17493 Greifswald - Insel Riems Tel: +49 38351 7 1889/1602 https://www.fli.de/ ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯ Instagram<https://www.instagram.com/loeffler_news> LinkedIn<https://www.linkedin.com/company/friedrich-loeffler-institut> Von: Böhm, Sebastian <Sebastian.Boehm(a)fli.de> Gesendet: Donnerstag, 20. Februar 2025 13:30 An: anandhi.iyappan <anandhi.iyappan(a)embl.de>; florian.heyl <florian.heyl(a)dkfz.de>; josh <josh(a)openmicroscopy.org>; karoline.mauer <karoline.mauer(a)dzne.de>; Koepler, Oliver <Oliver.Koepler(a)tib.eu>; koray.kirli <koray.kirli(a)dkfz-heidelberg.de>; kuebra.narci <kuebra.narci(a)dkfz.de>; Luiz.Gadelha <Luiz.Gadelha(a)dkfz-heidelberg.de>; martin.golebiewski <martin.golebiewski(a)h-its.org>; mschulze <mschulze(a)dife.de>; Naouel Karam <karam(a)infai.org>; Roman Baum <baum(a)zbmed.de>; sven.nahnsen <sven.nahnsen(a)uni-tuebingen.de>; usax <usax(a)med.uni-goettingen.de>; Vorisek, Carina Nina <carina-nina.vorisek(a)bih-charite.de>; NFDI TA1&2 (nfdi4immuno-ta1-2(a)lists.nfdi.de) <nfdi4immuno-ta1-2(a)lists.nfdi.de> Betreff: [nfdi4immuno-ta1+2] BioMed Metadata Interoperability Meeting February Dear all, thank you very much for the quick meeting yesterday. The protocol for this meeting can be found on Nextcloud and attached as pdf, For the ones that do not yet have access to NextCloud. Connecting the information about the consortia and our group members, we currently have the following status: Immuno GHGA Health Microbiota BioImage Biodiversity Sebastian Böhm Anandhi Iyapp. Carina Vorisek Josh Moore Naouel Karam Sebastian Ferr. Karoline Mauer Martin Gobl. Vera Bockhorn Luiz Gadelha Ulrich Sax Ulrik Stevbro Kuebra Narci Matth. Schulze Katherina Siew. Florian Heyl Lucas Barone Sven Nahnsen Please let me know if I forgot anyone or someone needs to be added or wants to be removed. If from every consortia one member could please prepare a <= 15 minutes walkthrough to their metadata set and present the "minimal essential metadata" (explanation at the bottom, and please send them to me before the meeting) on the next meeting in March, that would be great. Please let me know until March the 10th who that would be for your consortia. As well it was asked about the option to meet in person for some fruitful discussion. Since NFDI4Immuno is already meeting in Berlin end of April, we thought about the possibility to annex those. Please find here a short Nuudel-poll to vote for or against the meeting and the according timeslot: https://nuudel.digitalcourage.de/il6wzr3uECRVZJmh<https://scanmail.trustwave.com/?c=4477&d=_ri355pXvvn_5ODhbIBzKYsoLo9eQaXreZ…> Please indicate your availability within the next 14 days (6th March), as we would need to organise the meeting swiftly. Time and day for the next meeting will stay the same, so we will meet again on the 19th of March. Have a great time until then and don't forget the above tasks. Best wishes, Sebastian *MEM: Minimal set of Metadata that would be needed to identify the availability of a dataset regarding e.g. a certain disease. Dr. Sebastian Böhm Institut für Immunologie ___________________________________________ Friedrich-Loeffler-Institut Bundesforschungsinstitut für Tiergesundheit Federal Research Institute for Animal Health Südufer 10 | 17493 Greifswald - Insel Riems Tel: +49 38351 7 1889/1602 https://www.fli.de/<https://scanmail.trustwave.com/?c=4477&d=_ri355pXvvn_5ODhbIBzKYsoLo9eQaXreZ…> ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯ Instagram<https://scanmail.trustwave.com/?c=4477&d=_ri355pXvvn_5ODhbIBzKYsoLo9eQaXreZ…> LinkedIn<https://scanmail.trustwave.com/?c=4477&d=_ri355pXvvn_5ODhbIBzKYsoLo9eQaXreZ…>

1 year, 1 month

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INFO: Friendly reminder about tomorrow's TA1/TA2 call

by Stervbo,Ulrik

Dear TA1/2 Members, This is a friendly reminder about our joint TA1/TA2 call scheduled for tomorrow from 11:00 - 12:00 (11:58). You can join the call using the following link: https://conf.dfn.de/webapp/#/?conference=979176819. The PIN is 7570 (host pin: 7579). Please let me know if you are unavailable tomorrow. We have the following updates/FYI/reminders which we will not cover at the call: Here are some updates and reminders that we will not discuss during the call: - Go through the All-hands proposals and see if new ideas are triggered: https://nextcloud.nfdi4immuno.de/f/14516 - Deadline for new suggestions is Friday, 2025-03-07 You can find the call minutes on the NFDI4Immuno NextCloud under Task Area 1 > Call minutes (https://nextcloud.nfdi4immuno.de/f/1608). The agenda for tomorrow's call is stored at the same location. Regular joint TA1/TA2 calls are every Thursday 11:00 - 12:00. Best, Ulrik ---- Dr. rer. nat. Ulrik Stervbo Center for Translational Medicine, Immunology, and Transplantation Marien Hospital Herne - Universitätsklinikum der Ruhr-Universität Bochum Hölkeskampring 40 44623 Herne Germany Immundiagnostik Marien Hospital Herne - Universitätsklinikum der Ruhr-Universität Bochum Düngelstr 33 44623 Herne Germany Tel: +49 234 509 590 54 www.marienhospital-herne.de/TranslationaleMedizin<http://www.marienhospital-herne.de/TranslationaleMedizin> www.babel-lab.de<http://www.babel-lab.de/> _______________________________________________________________ Mitten in der St. Elisabeth Gruppe: St. Anna Hospital Herne, Marien Hospital Herne - Universitätsklinikum der Ruhr-Universität Bochum, Marien Hospital Witten, Rheumazentrum Ruhrgebiet, St. Marien Hospital Eickel, Medizinische Reha für psychische Gesundheit, St. Elisabeth Stift Herne, Senioreneinrichtungen Widumer Höfe, Gästehaus St. Elisabeth, Ambulante Pflege, MVZ Ärzte - Herne | Wanne | Witten, Lukas Hospiz Herne, St. Elisabeth Hospiz Witten, Bildungszentrum Ruhr, Bildungswerk, Campus der St. Elisabeth Gruppe, Kinder in der St. Elisabeth Gruppe _______________________________________________________________ Aufsichtsratsvorsitzender: Dr. Hans Willmes Geschäftsführung: Dr. Sabine Edlinger, Simone Lauer Registergericht: HRB 9735 Amtsgericht Bochum St.-Nr.: 325/5894/2251 _______________________________________________________________ Wir bitten wegen der aktuellen Virenangriffe um folgende Beachtung: Das Sicherheitskonzept der St. Elisabeth Gruppe erlaubt momentan keine Zustellung von .doc (x) und .xls(x) Dateien! Schicken Sie Dokumente nur in Form von .pdf Dateien oder nehmen Sie Kontakt auf, um andere Übertragungsmöglichkeiten abzusprechen.

1 year, 1 month

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2026

2025

NFDI4Immuno - TA1 & TA2 March 2025

2026

2025

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NFDI4Immuno - TA1 & TA2 March 2025